In This Section

Canker Diseases and Root Rots

Author: Paul Hagerman - former Horticultural Crop Advisor/OMAFRA; Bernt Solymár - former Pome Fruit IPM Specialist/OMAFRA
Creation Date: 01 April 1999
Last Reviewed: 20 April 2005


Table of Contents

  1. Introduction
  2. Cankers
  3. Root Rots

Introduction

Any decay of the wood or bark is referred to as a canker. There are several types of cankers that affect apples. This section deals with four major "aggressive" cankers of healthy apple trees (trunk, limbs and branches) as well as decay of the root and crown regions caused by Phytophthora. Other cankers and rots affect apple trees, but they are generally non-aggressive, attacking only dead or weakened wood, and therefore are of little economic importance.

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Cankers

Description

Cankers result in an area of dead bark that may become discoloured, sunken, cracked, or fall away altogether. Often the rest of the branch beyond the canker dies or become much less productive. While some cankers expand year after year i.e., Nectria, others stay the same size but release spores that can begin new cankers elsewhere i.e., Anthracnose.

It is difficult to assess the amount of damage caused by cankers in an orchard. They reduce the growth and yield of individual trees and may lead to their death. Some types of cankers give rise to related diseases elsewhere in the tree, such as leaf spots, fruit rot or shoot blight. A few cankers left uncontrolled in an orchard can spread rapidly in favourable weather to infect and weaken a high percentage of trees in a block.

In general, apple cultivars do not display much difference in susceptibility to cankers. The organisms that cause cankers are generalists, infecting all apple varieties as well as many other hardwood species. Fireblight is an exception to this rule as there are clear differences in susceptibility among cultivars. This disease is outlined on the Fireblight page.

Table 1 describes the symptoms of each canker and the conditions that favour its spread. Since management techniques are similar for all cankers, these are dealt with in the Management section below.

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Management

Removal of existing cankers is time consuming and often not completely successful. Fungicides and bactericides can reduce the spread of cankers and their associated diseases, but they are not usually effective at curing existing infections. It is far better to prevent the establishment of cankers by following good horticultural practices.

  • Keep pruning tools sharp to avoid ragged cuts or torn bark at cuts.
  • Prune in winter before sap flow begins, to minimize the chance of disease organisms being spread by pruning tools.
  • Prune branches back to the collar, avoiding stubs but leaving the collar intact to heal the wound.
  • Prune out all dead wood and remove fruit mummies as they both serve as reservoirs for disease organisms.
  • Remove cankers promptly by pruning the branch several inches below the canker. Where cankers occur on the main trunk, it is sometimes possible to save the tree by cutting away diseased tissue and encouraging the bark to heal around the wound (Figures 1 & 2)
  • Remove other hardwood trees with cankers in the vicinity of the orchard.
  • Burn prunings or remove them from the orchard promptly. If this is not possible, chopping prunings hastens their breakdown and reduces the risk of disease spread.
  • Inspect nursery stock carefully before planting and discard any trees with cankers.

Image of tree with canker and person with chainsaw scarifying canker.

Figure 1. Scarifying canker with modified chainsaw.

Imageof trunk with treated canker.

Figure 2. Scarified canker two months after treatment.


Table 1. Cankers Found in Ontario Orchards

Common Names  Nectria Canker,
European Canker,
Apple Canker
Anthracnose Canker,
Fiddlestring Canker,
Bull's-eye Rot
Black Rot Canker,
Frog-eye Leaf Spot
Scientific Names  Nectria galligena Pezicula malicorticis,
Cryptosporiopsis curvispora
Physalospora obtusa, Botryosphaeria obtusa
Common Sites of Infection Wounds, such as old pruning wounds, leaf and fruit scars, etc. Healthy wood on trunk of scaffold limbs. Commonly invades dead wood such as fireblight cankers and areas of winter injury; can also infect healthy wood.
Alternate Hosts maple, birch, hickory, poplar, beech and hawthorn  pear, peach, apricot, cherry, serviceberry, hawthorn and mountain ash pear and many hardwood trees
Symptoms Nectria cankers form a rough collar around a wound site (Figures 3&4), and this collar often grows larger each year. The result is a large canker, showing rings of increasing size (Figure 5). Cankers often girdle a large limb or trunk, killing all branches beyond that point. Trees infected in the nursery exhibit poor growth and eventual death (Figure 6) Infections often occur in the fall, and by the following summer, they are visible as small circular spots that appear reddish when wet. As they enlarge, they become oval and slightly sunken. In the fall, the canker dries out and cracks at the margins (Figure 7). Often an oval-shaped piece of bark will fall off to reveal long thread-like fibres (fiddlestrings) beneath (Figure 8). Anthracnose cankers rarely get any bigger after the first year. Anthracnose is sometimes confused with oil injury (Figure 9). Fruit symptoms develop in storage and result in softened, external breakdown (Figure 10). Black rot cankers are often difficult to see, as they do not cause distinct holes in the bark. Rather, they appear as a roughness or peeling of bark along a limb. The canker looks like oil injury but is more severe. It may extend for 50cm or more along a limb (Figure 11). Leaf symptoms are referred to as "frog-eye leafspot" (Figure 12). Fruit show symptoms in the field with rot developing near harvest or in storage (Figure 13).
Favourable Conditions Most infections occur when temperatures are 10-16°C and moisture is present. Poorly drained orchards are more prone to Nectria canker. Excessive vegetative growth also makes trees more susceptible . Ragged pruning cuts and branch stubs increase the risk of cankers developing at these wound sites. Cool, wet autumn weather. Fruit mummies that remain on the tree after thinning can become infected and spread the disease. Pruning cuts that leave a stub or close pruning that doesn't leave a collar increases the chance of black rot infection. Most infections occur in the spring and early summer, in periods of rain or high humidity. The optimum temperature for infection is 20-27°C, but infection can occur as low as 8°C.
Other Tree Parts Affected A fruit rot associated with Nectria occurs elsewhere but has not been observed in Ontario. Spores from the cankers can cause bull's-eye rot on the fruit before harvest or in storage. The fruit lesions are round, with a dark brown edge and a light brown centre. This fungus also causes a fruit rot (black rot) and leaf spotting (frog-eye leaf spot). On the fruit, black rot begins early in the season as a small red speck. These spots remain small, 1mm until the fruit begins to mature, but then enlarge rapidly to form a series of concentric rings that alternate form black to brown. On the leaves, frog-eye leaf spot begins shortly after petal fall as small purple flecks. These enlarge to for circular lesions with dark margins and tan centres, resembling a frog's eye. In severe cases, this leaf spot can lead to early defoliation.

 

Image of trunk with canker.

Figure 3. European canker infection at dormant pruning cut.

Image of cross section of trunk with canker.

Figure 4. Cross-section of trunk showing entry of European canker.

Image of branches with canker.

Figure 5. European canker - "included" bark at branch crotch


 Image of young tree trunk with canker.

Figure 6. European canker on trunk of young tree.

Image of branch with brown sunken canker.

Figure 7. Early symptoms of anthracnose canker. 

Image of branch with canker.

Figure 8. Anthracnose cankers showing typical fiddle-string appearance

Image of twig with bark blistering.

Figure 9.
Oil injury to limb.

Image of apple with rot near stem end.

Figure 10.
Bull's-eye rot on fruit.

Image of branch with canker.

Figure 11. Young sporulating black rot canker.


Image of leaf with frog-eye leaf spot.

Figure 12.
Frog-eye leaf spot.

Image of apple with canker at calyx end.

Figure 13. Black rot on fruit.

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Root Rots

While several organisms are known to cause root rot in apples, the most common ones in Ontario are various species of Phytophthora. The disease is referred to by various names depending on the part of the tree that is affected.

  • Collar rot affects the tree above the soil line.
  • Crown rot affects the tree below the soil in the area where the roots join the stem.
  • Root rot affects the ends of the roots.

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Biology

Phytophthora is a soil-borne disease and the species that effect apple (mainly P.cactorum and P.syringar) can also live on other native and agricultural plants. While the fungus is present in many orchard soils, it usually only becomes a problem in areas where the soil remains saturated for periods of time. The disease does not spread through the air - dissemination takes place with water movement or on contaminated nursery stock. Most infections occur in the spring, though they can begin at any time of year.

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Damage

Phytophthora - affected trees show general symptoms of vascular dysfunction: growth is stunted, fruit are small, leaves often appear yellow and may turn purple in spring or fall (Figure 14). Trees may decline over several years before dying. The disease often affects several trees in one area of the orchard - especially low lying areas or poorly drained spots. A very wet fall or spring may result in an increase in the disease.

When the bark is removed from the lower trunk or the roots, the wood of Phytophthora - affected tissues will be reddish brown, instead of the greenish white of healthy wood. Usually there is no sign of any fungal growth.

Image of tree showing root with phytophthora root rot.

Figure 14. Phytophthora root rot.

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Management

Select planting sites and manage soil water so soil is not saturated for prolonged periods. Select rootstocks with some resistance to Phytophthora. Most resistant are M.9 and seedling rootstocks. M.26, M.7 and MM.106 are considered moderately to very susceptible. Fungicide treatments may be effective if applied on a preventative schedule. Once trees begin to show symptoms of Phytophthora, fungicides will not cure the problem.

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For more information:
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E-mail: ag.info.omafra@ontario.ca